Module Details

The information contained in this module specification was correct at the time of publication but may be subject to change, either during the session because of unforeseen circumstances, or following review of the module at the end of the session. Queries about the module should be directed to the member of staff with responsibility for the module.
Title BIOCATALYSIS IN SYNTHETIC ORGANIC CHEMISTRY
Code CHEM434
Coordinator Dr AJ Carnell
Chemistry
Year CATS Level Semester CATS Value
Session 2008-09 M Level Second Semester 7.5

Aims

The aims of this module are

  • To introduce students to the main classes of organic reactions that can be catalysed by enzymes for organic synthesis
  • To create an appreciation of the application of biocatalysts in industry
  • To introduce strategies for improving biocatalysts by directed evolutior

Learning Outcomes

By the end of the module, students should:

  • Understand how enzymes can be applied in organic synthesis
  • Have an awareness of current limitations in the application of biocatalysts
  • Demonstrate a knowledge of key classes of enzyme reactions.
  • Show an understanding of cofactor requirements and recycling strategies
  • Have an appreciation of the use directed evolution methods for enzyme improvement

Syllabus

Enzymes are widely used as catalysts for the synthesis of pharmaceuticals, speciality and industrial chemicals. For example, naturally occuring penicillins are modified using enzymes to make semi-synthetic versions that are less prone to antibiotic resistant strains. Many chiral products are made in high enantiomeric purity using enzymes to catalyse enantioselective reactions. Polyacrylamide is made on a very large scale using acrylamide that is made by enzymatic hydrolysis of acrylonitrile. In this module students will be introduced the main classes of enzymes used in biocatalysis and discover how they can be applied in the short and efficient (chemoenzymatic) synthesis of a range of high value materials. Particular emphasis will be placed on application in the synthesis of pharmaceuticals and agrochemicals. Current and future challenges for the area of biocatalysis will be discussed, such as the use of directed evolution to c reate "designer enzymes" with improved attributes such as stability, activity and enantioselectivity.

  • Introduction to enzymes – structure and function
  • Organic reaction types which can be carried out using enzymes
  • Chiral selectivity: kinetic resolution of enantiomers, desymmetrisation of prochiral and meso compounds
  • Large scale commercial applications – an introduction.
  • Hydrolytic reactions: lipases, esterases, proteases including catalytic triad mechanism. Nitrile hydratases, epoxide hydrolases. 
  • Reactions in organic solvents: using lipases and proteases in reverse - applications in industry
  • Immobilisation techniques: use of polymer supports and absorption methods.
  • Reduction reactions: asymmetric reduction of ketones and ketoesters, nitro group reduction, reduction of C=C bonds, recycling of cofactors.
  • Oxidation reactions: hydroxylation, asymmetric sulphoxidation and epoxidation, Baeyer Villiger rearrangement, asymmetric dihydroxylation of aromatics – application in the synthesis of natural products.
  • Carbon-carbon bond forming reactions:  asymmetric aldol reaction, acyl group transfer, cyanohydrin formation.
  • Directed evolution of enzymes – mutation techniques and screening/selection strategies. Future prospects.

Teaching and Learning Strategies

The course will be delivered through a series of 50 minute lectures (16) and two 1 hour tutorials.


Teaching Schedule

  Lectures Seminars Tutorials Lab Practicals Fieldwork Placement Other TOTAL
Study Hours 16

        2
workshops
18
Timetable (if known) Tues 10-11am, Thurs 9-10am
 
           
Private Study 57
TOTAL HOURS 75

Assessment

EXAM Duration Timing
(Semester)
% of
final
mark
Resit/resubmission
opportunity
Penalty for late
submission
Notes
written paper  2 hours  2nd  100  August resit opportunity for PGT students only, where applicable. see notes    "Students who started an MChem programme in 200304 or later can resit the failed assessments at the next normal opportunity" Year 3 ( and Year 4) students resit at the next normal opportunity.  
CONTINUOUS Duration Timing
(Semester)
% of
final
mark
Resit/resubmission
opportunity
Penalty for late
submission
Notes
             

Recommended Texts

Biotransformations for Organic Chemistry – a Textbook, 5th Ed., Kurt Fabe Publisher:Springer-Verlag Berlin and Heidelberg GmbH & Co. K ISBN: 3540200975